仓库/Skill 库

基于文件、使用 Markdown 的 wikiA file based wiki that uses markdown

一款面向学术写作的原生 macOS Markdown 编辑器，集成了兼容 Zotero 的文献管理器、表格数据库与任务追踪功能。A native macOS Markdown editor for academic writing, featuring an integrated Zotero-friendly bibliography manager, spreadsheet databases, and task tracking.

一次查询，覆盖全部学术数据库；每次运行归档井然有序。跨 OpenAlex、ADS、arXiv、INSPIRE、Scopus、Semantic Scholar、Crossref 与 WoS 的可复现、合规文献检索One query. Every scholarly database. A tidy archive of every run. Reproducible, ToS-compliant literature search across OpenAlex, ADS, arXiv, INSPIRE, Scopus, Semantic Scholar, Crossref and WoS.

用于系统综述检索的交互式工具：PICO 构建器、数据库语法转换器与邻近算子构建器。Interactive tools for systematic review searching: PICO builder, database syntax converter, and proximity-operator builder.

本仓库包含用于复现论文《Pharmacological treatments for ADHD and comorbid substance use disorder: a systematic review and network meta-analysis》中数据库与分析的 R 代码。This repository holds the R codes for reproducing the databases and analyses in my paper "Pharmacological treatments for ADHD and comorbid substance use disorder: a systematic review and network meta-analysis".

GMS 6803 临床研究数据科学课程材料，含幻灯片、代码与实操实验，内容涵盖真实世界健康数据、基于 EHR 的队列构建、SQL、Python、统计分析与临床研究中的机器学习Course materials for GMS 6803 Data Science for Clinical Research, including slides, code, and hands-on labs on real-world health data, EHR-based cohort development, SQL, Python, statistical analysis, and machine learning for clinical research.

关于精神病学障碍中迷幻疗法的活体系统综述，基于 Docker 化 Dash 应用与 PostgreSQL 后端构建。Living systematic review of psychedelic therapy in psychiatric disorders. Built as a dockerized Dash app with PostgreSQL backend.

开源 DBMS 生态的 Reference Quotient 分析与可复现研究流水线。项目列表每月通过 https://github.com/birdflyi/od_label_issue_gen/tree/main/data/database_repo_label_dataframe 中的 csv 文件更新Reference Quotient analysis and reproducible research pipeline for the open-source DBMS ecosystem. The projects list are updated in the csv files in https://github.com/birdflyi/od_label_issue_gen/tree/main/data/database_repo_label_dataframe monthly.

自动化 Python 兼容性补丁工具，将 Google Scholar PDF Reader 从 Chromium 移植到基于 Firefox 的浏览器，并使用 IndexedDB 集成自定义离线论文数据库。Automated Python compatibility patcher to port Google Scholar PDF Reader from Chromium to Firefox-based browsers, integrating a custom offline paper database using IndexedDB.

从学术数据库中采集学术元数据，用于组织文献检索与构建研究参考目录。Harvest scholarly metadata from academic databases to organize literature searches and build research bibliographies.

"Domain-Driven Design in Practice: A Large-Scale Empirical Characterisation of the Open-Source Ecosystem" 的复现包——包含数据收集工具、GPT-4o 语义验证流水线，以及针对所有研究问题的 SQL 查询。Replication package for "Domain-Driven Design in Practice: A Large-Scale Empirical Characterisation of the Open-Source Ecosystem" — includes data collection tools, GPT-4o semantic validation pipeline, and SQL queries for all research questions.

Mascarene Paleo 是记录马斯卡林群岛古生物与亚化石记录的研发基础设施。该仓库旨在提供关于标本、分类群、地点、出版物、历史资料、数字资源及未解研究问题的透明、可更新、可引用的记录。Mascarene Paleo is a developing research infrastructure for documenting the palaeontological and subfossil record of the Mascarene Islands. This repository is intended to provide a transparent, updateable, and citable record of specimens, taxa, localities, publications, historical sources, digital resources, and unresolved research questions.

von der Heyde, L., Keusch, F., Buskirk, T. D., & Eck, A. (2026). AI in the Loop?! A Systematic Review of the Use of Large Language Models in Survey and Public Opinion Research. SocArXiv. https://doi.org/10.31235/osf.io/eubj4_v1 的复现材料与文献数据库Replication materials and literature databases for von der Heyde, L., Keusch, F., Buskirk, T. D., & Eck, A. (2026). AI in the Loop?! A Systematic Review of the Use of Large Language Models in Survey and Public Opinion Research. SocArXiv. https://doi.org/10.31235/osf.io/eubj4_v1.

一套可移植、可复现的 PRISMA 2020 系统综述流水线：检索 15 个数据库、执行去重、以完整审计追踪管理人工筛选，并根据决策日志计算 PRISMA 流程计数。A portable, reproducible PRISMA 2020 systematic literature review pipeline. Searches 15 databases, deduplicates, manages human screening with a full audit trail, and computes PRISMA flow counts from the decision log.

引文管理 SaaS：在 1000+ 目录中管理商家信息。Uberall 竞品。Citation Management SaaS: Manage business listings across 1000+ directories. Uberall competitor.

将研究压缩包转化为可搜索、可引用的素材。拆分为论文、代码与数据集，索引后即可提出 Deep Research 问题，并引用页码与源行。Self-hosted（Postgres、MinIO、Qdrant）。Turn research zips into searchable, citable materials. Split papers, code, and datasets; index them; ask Deep Research questions that cite pages and source lines. Self-hosted (Postgres, MinIO, Qdrant).

面向基于丙泊酚的 ICU 镇静的计算数字孪生：SQL 数据提取、特征工程、消融实验和论文图表。Computational digital twin for propofol-based ICU sedation: SQL extraction, feature engineering, ablation experiments, and publication figures.

自包含的系统综述工作台——多库检索、双评审筛选、AI 辅助批判性评价（RoB 2、ROBINS-I、GRADE…）。单 HTML 文件，无后端，数据不离开浏览器。Self-contained systematic review workbench — multi-database search, dual-reviewer screening, AI-assisted critical appraisal (RoB 2, ROBINS-I, GRADE…). One HTML file, no backend, data never leaves your browser.